STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106888080Dipeptidase 2-like. (431 aa)    
Predicted Functional Partners:
CYB5R4
Cytochrome b5 reductase 4.
    
  0.733
ACADM
acyl-CoA dehydrogenase medium chain.
    
  0.563
ENSCPUP00000000300
annotation not available
  
 
  0.543
AIFM3
Apoptosis inducing factor mitochondria associated 3.
  
 
  0.543
AIFM2
Apoptosis inducing factor mitochondria associated 2.
  
 
  0.490
CNDP2
Carnosine dipeptidase 2.
  
  
 0.476
ENSCPUP00000014734
annotation not available
     
 0.460
ENSCPUP00000006132
annotation not available
      
 0.437
DPEP1
Dipeptidase 1.
  
  
 
0.417
ENSCPUP00000022198
annotation not available
    
  0.411
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.