STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNE2Cyclin E2. (404 aa)    
Predicted Functional Partners:
CDKN1B
Cyclin dependent kinase inhibitor 1B.
   
 0.961
CDKN1A
Cyclin dependent kinase inhibitor 1A.
   
 0.961
ENSCPUP00000004243
annotation not available
   
 0.959
RB1
RB transcriptional corepressor 1.
   
 0.951
RBL2
RB transcriptional corepressor like 2.
   
 0.949
RBL1
RB transcriptional corepressor like 1.
   
 0.949
SKP1
S-phase kinase associated protein 1.
    
 0.946
CDK3
Cyclin dependent kinase 3.
   
 0.940
ENSCPUP00000020354
annotation not available
   
 0.940
ENSCPUP00000020356
annotation not available
   
 0.940
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.