STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQCarboxypeptidase Q. (469 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
   
  0.965
ENSCPUP00000011771
annotation not available
    
 0.754
MPL
MPL proto-oncogene, thrombopoietin receptor.
     
 0.624
SORL1
Sortilin related receptor 1.
     
 0.620
CSF2RB
Cytokine receptor common subunit beta-like.
     
 0.616
IL7R
Interleukin 7 receptor.
     
 0.615
GALT
Galactose-1-phosphate uridylyltransferase.
  
 
  0.613
LOC106896489
Somatotropin.
   
 
  0.609
ENSCPUP00000004857
annotation not available
     
 0.600
IL13RA2
Interleukin 13 receptor subunit alpha 2.
     
 0.600
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.