STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKAP6A-kinase anchoring protein 6. (2302 aa)    
Predicted Functional Partners:
RAPGEF3
Rap guanine nucleotide exchange factor 3.
    
 
 0.645
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.614
AKAP7
A-kinase anchoring protein 7.
      
 0.546
AKAP1
A-kinase anchoring protein 1.
      
 0.532
RYR3
Ryanodine receptor 3.
   
 
 0.520
RYR2
Ryanodine receptor 2.
   
 
 0.520
ENSCPUP00000019375
annotation not available
      
 0.463
RUSC2
RUN and SH3 domain containing 2.
   
  
 0.457
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 
 0.454
GTF2F1
General transcription factor IIF subunit 1.
      
 0.448
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.