STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNMT3ADNA methyltransferase 3 alpha. (827 aa)    
Predicted Functional Partners:
DNMT3B
DNA methyltransferase 3 beta.
  
0.980
DNMT1
DNA methyltransferase 1.
   
 0.963
ENSCPUP00000021679
annotation not available
    
 
 0.961
MAD2L1
Mitotic arrest deficient 2 like 1.
   
 0.881
CKAP5
Cytoskeleton associated protein 5.
   
 
 0.852
AURKA
Aurora kinase A.
   
 0.847
TRDMT1
tRNA aspartic acid methyltransferase 1.
     
 0.845
MAT2B
Methionine adenosyltransferase 2B.
   
 
 0.844
AHCY
Adenosylhomocysteinase.
     
 0.843
BUB3
Mitotic checkpoint protein BUB3.
   
 0.811
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.