STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A6Solute carrier family 30 member 6. (460 aa)    
Predicted Functional Partners:
SLC30A5
Solute carrier family 30 member 5.
  
 
0.886
SLC30A2
Solute carrier family 30 member 2.
  
 
 
 0.651
SLC39A13
Solute carrier family 39 member 13.
   
 0.632
SLC39A12
Solute carrier family 39 member 12.
   
 0.625
SLC39A7
Zinc transporter SLC39A7-like.
  
 0.613
SLC30A1
Solute carrier family 30 member 1.
    
 
 0.609
SLC30A9
Solute carrier family 30 member 9.
   
 
 0.604
SLC30A4
Solute carrier family 30 member 4.
  
 
 
0.604
NDUFS2
NADH:ubiquinone oxidoreductase core subunit S2.
      
 0.601
SLC30A3
Solute carrier family 30 member 3.
  
 
 
 0.588
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.