STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKPleckstrin. (353 aa)    
Predicted Functional Partners:
FHDC1
FH2 domain containing 1.
      
 0.512
GRID2IP
Grid2 interacting protein.
    
 
 0.482
RGS18
Regulator of G-protein signaling 18-like.
   
  
 0.463
CDC42
Cell division cycle 42.
   
 
 0.462
ACTL6A
Actin like 6A.
     
 0.450
CNN3
Calponin 3.
     
 0.438
RABIF
RAB interacting factor.
      
 0.438
ENSCPUP00000026980
annotation not available
     
 0.438
TLN2
Talin 2.
     
 0.434
TLN1
Talin 1.
     
 0.434
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.