STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM17Transmembrane protein 17-like. (218 aa)    
Predicted Functional Partners:
CC2D2A
Coiled-coil and C2 domain containing 2A.
    
 0.964
TMEM231
Transmembrane protein 231.
    
 0.963
TMEM67
Transmembrane protein 67.
     
 0.962
B9D1
B9 domain containing 1.
    
 0.962
TMEM216
Transmembrane protein 216.
   
 
 0.956
TCTN1
Tectonic family member 1.
     
 0.954
MKS1
MKS transition zone complex subunit 1.
     
 0.950
CEP290
Centrosomal protein 290.
     
 0.869
AHI1
Abelson helper integration site 1.
     
 0.844
TMEM80
Transmembrane protein 80.
   
 
 0.790
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.