STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIE1Tyrosine kinase with immunoglobulin like and EGF like domains 1. (1129 aa)    
Predicted Functional Partners:
ANGPT2
Angiopoietin 2.
   
 0.926
PDGFC
Platelet derived growth factor C.
    
 0.913
ANGPT4
Angiopoietin 4.
   
 0.894
ANGPT1
Angiopoietin 1.
   
 0.894
PDGFB
Platelet derived growth factor subunit B.
    
 0.881
VEGFC
Vascular endothelial growth factor C.
    
 0.876
KITLG
KIT ligand.
    
 0.875
FGF1
Fibroblast growth factor 1.
    
 0.870
VEGFA
Vascular endothelial growth factor A.
    
 0.869
PGF
Placental growth factor.
    
 0.868
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.