STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106890434Lysosomal alpha-glucosidase-like. (940 aa)    
Predicted Functional Partners:
LOC106886497
Pancreatic alpha-amylase-like.
  
 
 0.875
GNPTG
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.856
GANC
Glucosidase alpha, neutral C.
  
  
 
0.854
GLA
Galactosidase alpha.
     
 0.850
SI
Sucrase-isomaltase.
  
  
 
0.842
HK3
Hexokinase 3.
     
 0.839
GAA
Glucosidase alpha, acid.
  
  
 
0.839
HKDC1
Putative hexokinase HKDC1.
     
 0.839
HK2
Hexokinase-2.
     
 0.783
HK1
Hexokinase-1.
     
 0.783
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.