STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000004243annotation not available (147 aa)    
Predicted Functional Partners:
SKP2
S-phase kinase associated protein 2.
    
 0.963
CCNE1
Cyclin E1.
   
 0.962
CCNE2
Cyclin E2.
   
 0.959
CCND1
Cyclin D1.
   
 0.957
CCNA2
Cyclin A2.
    
 0.956
CCNA1
Cyclin A1.
    
 0.943
CUL1
Cullin 1.
    
 0.939
SKP1
S-phase kinase associated protein 1.
    
 0.937
RBX1
Ring-box 1.
   
 0.919
PCNA
Proliferating cell nuclear antigen.
   
 0.913
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.