STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZZZ3Zinc finger ZZ-type containing 3. (906 aa)    
Predicted Functional Partners:
SGF29
SAGA complex associated factor 29.
    
 0.999
KAT14
Lysine acetyltransferase 14.
   
 0.997
TADA3
Transcriptional adaptor 3.
    
 0.994
TADA2A
Transcriptional adaptor 2A.
    
 0.988
MBIP
MAP3K12 binding inhibitory protein 1.
    
 0.983
YEATS2
YEATS domain containing 2.
    
 0.983
DR1
Down-regulator of transcription 1.
    
 0.969
UBXN7
UBX domain protein 7.
   
 
  0.967
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.964
TADA2B
Transcriptional adaptor 2B.
    
 0.962
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.