STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPAR3Lysophosphatidic acid receptor 3. (361 aa)    
Predicted Functional Partners:
LPAR4
Lysophosphatidic acid receptor 4.
     
 0.848
ENSCPUP00000000773
annotation not available
    
  0.762
LPAR6
Lysophosphatidic acid receptor 6.
     
 0.556
ENSCPUP00000025851
annotation not available
     
 0.556
ENSCPUP00000025852
annotation not available
     
 0.556
ENSCPUP00000025853
annotation not available
     
 0.556
GPR55
G protein-coupled receptor 55.
     
 0.556
LOC106902574
Lysophosphatidic acid receptor 6-like.
     
 0.556
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.545
GNA14
Guanine nucleotide-binding protein subunit alpha-14.
    
 0.545
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.