STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP299Cilia and flagella associated protein 299. (225 aa)    
Predicted Functional Partners:
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 0.606
GRIN3B
Glutamate ionotropic receptor NMDA type subunit 3B.
    
 0.604
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
    
 0.604
NETO2
Neuropilin and tolloid like 2.
   
 0.589
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 0.579
HTR3A
5-hydroxytryptamine receptor 3A.
    
 0.579
C4orf47
Chromosome unknown open reading frame, human C4orf47.
   
  
 0.565
SCN4B
Sodium voltage-gated channel beta subunit 4.
     
 0.542
SCN3B
Sodium voltage-gated channel beta subunit 3.
   
 
  0.531
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
     
 0.522
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.