STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTF2Metal response element binding transcription factor 2. (596 aa)    
Predicted Functional Partners:
KDM6A
Lysine demethylase 6A.
    
 0.982
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.967
EED
Embryonic ectoderm development.
   
 0.950
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.944
JARID2
Jumonji and AT-rich interaction domain containing 2.
    
 0.939
KDM2A
Lysine demethylase 2A.
    
 0.938
KDM2B
Lysine demethylase 2B.
    
 0.938
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.918
INTS3
Integrator complex subunit 3.
    
 0.915
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.914
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.