STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXCL14C-X-C motif chemokine ligand 14. (98 aa)    
Predicted Functional Partners:
CXCL12
C-X-C motif chemokine ligand 12.
   
 
 0.968
CCL21
C-C motif chemokine ligand 21.
    
 
 0.959
ENSCPUP00000022340
annotation not available
    
 
 0.954
LOC106894455
C-C motif chemokine 4-like.
    
 
 0.951
CCL5
C-C motif chemokine 5-like.
    
 
 0.951
CXCR4
C-X-C motif chemokine receptor 4.
    
 0.934
LOC106890974
Lymphotactin-like.
    
 
 0.907
CXCR5
C-X-C motif chemokine receptor 5.
     
 0.897
LOC106895027
C-X-C chemokine receptor type 2-like.
     
 0.862
CCR7
C-C motif chemokine receptor 7.
     
 0.853
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.