STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPZL1Myelin protein zero like 1. (219 aa)    
Predicted Functional Partners:
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
 
 0.578
LOC106887783
Tyrosine-protein phosphatase non-receptor type 11-like.
    
 
 0.578
PSMC4
Proteasome 26S subunit, ATPase 4.
      
 0.555
PMP22
Peripheral myelin protein 22.
      
 0.546
RNMT
RNA guanine-7 methyltransferase.
      
 0.512
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
 
 0.478
GJB1
Gap junction protein beta 1.
      
 0.446
MBP
Myelin basic protein.
      
 0.439
NDUFS6
NADH:ubiquinone oxidoreductase subunit S6.
      
 0.438
GDAP1
Ganglioside induced differentiation associated protein 1.
      
 0.437
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.