STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NARFNuclear prelamin A recognition factor. (459 aa)    
Predicted Functional Partners:
CIAO1
Cytosolic iron-sulfur assembly component 1.
    
 0.942
CIAO2B
Cytosolic iron-sulfur assembly component 2B.
    
 0.935
CIAO2A
Cytosolic iron-sulfur assembly component 2A.
    
 0.922
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 0.906
ENSCPUP00000011559
annotation not available
    
 0.887
NDOR1
NADPH dependent diflavin oxidoreductase 1.
    
 0.838
LOC106895560
Adrenodoxin, mitochondrial-like.
    
 
 0.751
FDX1
Ferredoxin 1.
    
 
 0.751
NUBP1
Nucleotide binding protein 1.
   
 0.691
LOC106891918
Carnosine synthase 1-like.
   
 0.640
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.