STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLK1Tousled like kinase 1. (733 aa)    
Predicted Functional Partners:
TLK2
Tousled like kinase 2.
  
  
0.953
ASF1A
Anti-silencing function 1A histone chaperone.
    
 
 0.875
UIMC1
Ubiquitin interaction motif containing 1.
   
  
 0.598
CABIN1
Calcineurin binding protein 1.
    
 
 0.579
ENSCPUP00000005379
annotation not available
      
 0.539
POLG
DNA polymerase gamma, catalytic subunit.
      
 0.497
ENSCPUP00000023069
annotation not available
   
   0.463
HIRA
Protein HIRA.
    
 
 0.449
FANCI
FA complementation group I.
      
 0.438
HELQ
Helicase, POLQ like.
      
 0.431
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.