STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TP53I3Tumor protein p53 inducible protein 3. (334 aa)    
Predicted Functional Partners:
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.881
FASN
Fatty acid synthase.
  
0.804
LOC106899319
Etoposide-induced protein 2.4 homolog.
     
 0.778
ENSCPUP00000023529
annotation not available
     
 0.778
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.740
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
   
 0.707
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
   
 0.698
GCAT
Glycine C-acetyltransferase.
   
 0.690
ADHFE1
Alcohol dehydrogenase iron containing 1.
    
 0.688
OXSM
3-oxoacyl-ACP synthase, mitochondrial.
 
 
 0.665
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.