STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000006725annotation not available (451 aa)    
Predicted Functional Partners:
ZFAND4
Zinc finger AN1-type containing 4.
    
 0.544
RPS27A
Ribosomal protein S27a.
    
  0.530
OASL
2'-5'-oligoadenylate synthase 1-like.
    
 0.502
LOC106900028
polyubiquitin-B.
    
 0.502
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
  0.489
KDM2A
Lysine demethylase 2A.
    
  0.482
KDM2B
Lysine demethylase 2B.
    
  0.482
GAS7
Growth arrest specific 7.
    
  0.471
LOC106895106
Inducible T-cell costimulator-like.
    
 0.463
UBE2L5
Ubiquitin conjugating enzyme E2 L3.
    
  0.462
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.