STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUN1Sad1 and UNC84 domain containing 1. (906 aa)    
Predicted Functional Partners:
SUN2
Sad1 and UNC84 domain containing 2.
  
  
0.966
CLMN
Calmin.
    
 0.921
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
    
 0.911
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
    
 0.904
ENSCPUP00000021121
annotation not available
    
 0.866
ENSCPUP00000021129
annotation not available
    
 0.866
ENSCPUP00000021130
annotation not available
    
 0.866
ENSCPUP00000021134
annotation not available
    
 0.866
LMNB2
Lamin B2.
    
 0.717
LRMP
Lymphoid restricted membrane protein.
    
 0.705
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.