STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSTR4Somatostatin receptor 4. (413 aa)    
Predicted Functional Partners:
SST
Somatostatin.
   
 0.963
CORT
Cortistatin.
     
 0.855
EDN1
Endothelin 1.
    
  0.852
NPY
Neuropeptide Y.
   
 0.820
LOC106887763
Centromere protein S.
     
 0.820
GHRL
Ghrelin and obestatin prepropeptide.
    
 0.820
LOC106902860
Neurophysin 1-like.
    
  0.814
ENSCPUP00000000773
annotation not available
    
  0.762
GNAI2
G protein subunit alpha i2.
    
 0.687
GNAO1
G protein subunit alpha o1.
    
 0.687
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.