STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000007120annotation not available (556 aa)    
Predicted Functional Partners:
ENSCPUP00000007119
annotation not available
 
      0.899
GRB2
Growth factor receptor bound protein 2.
   
 0.839
ENSCPUP00000007065
annotation not available
   
 
 0.768
GRAP2
GRB2 related adaptor protein 2.
   
 0.652
GRAP
GRB2 related adaptor protein.
   
 0.641
PLCG2
Phospholipase C gamma 2.
   
  0.514
PLCG1
Phospholipase C gamma 1.
   
  0.514
SETX
Senataxin.
  
     0.441
LOC106902269
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like.
   
  0.409
MAB21L3
Mab-21 like 3.
  
 
   0.407
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.