STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASSF2Ras association domain family member 2. (323 aa)    
Predicted Functional Partners:
STK3
Serine/threonine kinase 3.
    
 0.903
STK4
Serine/threonine kinase 4.
    
 0.903
MTUS1
Microtubule associated scaffold protein 1.
    
 0.733
RASSF5
Ras association domain family member 5.
    
 
0.566
SAV1
Salvador family WW domain containing protein 1.
    
 
 0.565
ACSBG1
acyl-CoA synthetase bubblegum family member 1.
    
 0.488
ACSBG2
acyl-CoA synthetase bubblegum family member 2.
    
 0.488
FBXW11
F-box and WD repeat domain containing 11.
    
 0.484
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 0.484
LOC106897248
F-box/WD repeat-containing protein 1A-like.
    
 0.484
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.