STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPD1Glycerol-3-phosphate dehydrogenase 1. (349 aa)    
Predicted Functional Partners:
GPD2
Glycerol-3-phosphate dehydrogenase 2.
   
 0.943
GPD1L
Glycerol-3-phosphate dehydrogenase 1 like.
  
  
 
0.900
LOC106886675
Glycerol-3-phosphate dehydrogenase 1-like protein.
  
  
 
0.900
GPAM
Glycerol-3-phosphate acyltransferase, mitochondrial.
    
 0.879
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
    
 0.879
GNPAT
Glyceronephosphate O-acyltransferase.
    
 0.879
TKFC
Triokinase and FMN cyclase.
   
 
 0.869
AGPAT2
1-acylglycerol-3-phosphate O-acyltransferase 2.
    
 0.857
PLPP2
Phospholipid phosphatase 2.
    
 0.855
GPAT4
Glycerol-3-phosphate acyltransferase 4.
  
 
 0.851
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.