STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106894056Uncharacterized family 31 glucosidase KIAA1161-like. (704 aa)    
Predicted Functional Partners:
GNPTG
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.856
LOC106886497
Pancreatic alpha-amylase-like.
  
 
 0.696
GANC
Glucosidase alpha, neutral C.
 
  
 
0.657
GBE1
1,4-alpha-glucan branching enzyme 1.
    
 0.648
NUP54
Nucleoporin 54.
    
 0.640
GNE
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.640
GLA
Galactosidase alpha.
     
 0.637
MOGS
Mannosyl-oligosaccharide glucosidase.
   
 0.630
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
 
 0.619
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
    
 0.598
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.