STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000007677annotation not available (667 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.993
ENSCPUP00000007688
annotation not available
 
     0.945
ENSCPUP00000007684
annotation not available
 
     0.935
ENSCPUP00000007685
annotation not available
 
     0.935
ENSCPUP00000007692
annotation not available
 
    
0.914
SCN2B
Sodium voltage-gated channel beta subunit 2.
   
 0.857
SCN4B
Sodium voltage-gated channel beta subunit 4.
    
 0.766
SCN3B
Sodium voltage-gated channel beta subunit 3.
    
 0.752
WDR35
WD repeat domain 35.
    
 0.730
IFT122
Intraflagellar transport 122.
   
 0.724
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.