STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSBP1L1Heat shock factor binding protein 1 like 1. (94 aa)    
Predicted Functional Partners:
WASHC3
WASH complex subunit 3.
    
 0.896
WASHC1
WAS protein family homolog 1.
     
 0.816
LOC106895468
Heat shock factor protein 3-like.
    
 0.664
HSF4
Heat shock factor protein 4-like.
    
 0.664
HSF1
Heat shock transcription factor 1.
    
 0.664
HSF2
Heat shock transcription factor 2.
    
 0.664
CRYAB
Crystallin alpha B.
     
 0.589
RBX1
Ring-box 1.
   
    0.587
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
     
 0.585
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
     
 0.585
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.