STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABBR2Gamma-aminobutyric acid type B receptor subunit 2. (936 aa)    
Predicted Functional Partners:
GNB5
G protein subunit beta 5.
    
 0.859
GPR156
G protein-coupled receptor 156.
     
0.837
GNG7
G protein subunit gamma 7.
    
 0.837
GNG13
G protein subunit gamma 13.
    
 0.833
GNG12
G protein subunit gamma 12.
    
 0.832
GNG5
G protein subunit gamma 5.
    
  0.830
ENSCPUP00000012354
annotation not available
    
  0.830
GNG10
G protein subunit gamma 10.
    
  0.830
GNGT2
G protein subunit gamma transducin 2.
    
  0.830
GNB3
G protein subunit beta 3.
    
  0.816
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.