STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106889136Transcription factor HES-5-like. (161 aa)    
Predicted Functional Partners:
LOC106889135
Transcription factor HES-5-like.
  
 
 
0.838
HES4
Hes family bHLH transcription factor 4.
     
0.742
HES1
Hes family bHLH transcription factor 1.
     
0.742
LOC106902614
Transcription cofactor HES-6-like.
     
0.719
FANCF
FA complementation group F.
    
  0.642
FANCG
FA complementation group G.
    
  0.642
FANCC
FA complementation group C.
    
  0.642
FANCL
FA complementation group L.
    
  0.642
RPL10A
Ribosomal protein L10a.
    
  0.584
FANCE
FA complementation group E.
    
  0.584
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.