STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106891451long-chain-fatty-acid--CoA ligase 6. (711 aa)    
Predicted Functional Partners:
FASN
Fatty acid synthase.
   
 0.840
ACSL3
acyl-CoA synthetase long chain family member 3.
  
 
0.830
ACSL4
acyl-CoA synthetase long chain family member 4.
  
 
0.829
PPT1
Palmitoyl-protein thioesterase 1-like.
    
 0.818
LIPC
Lipase C, hepatic type.
    
 0.797
LPL
Lipoprotein lipase.
    
  0.796
LIPG
Lipase G, endothelial type.
    
  0.796
CEL
Bile salt-activated lipase-like.
  
 
 0.796
MGLL
Monoglyceride lipase.
    
 0.793
ACSBG1
acyl-CoA synthetase bubblegum family member 1.
  
 
 
0.765
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.