STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP2NOP2 nucleolar protein. (698 aa)    
Predicted Functional Partners:
EBNA1BP2
EBNA1 binding protein 2.
   
 0.997
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
  
 0.997
GTPBP4
GTP binding protein 4.
   
 0.997
GNL3
G protein nucleolar 3.
  
 0.996
NIP7
Nucleolar pre-rRNA processing protein NIP7.
  
 0.996
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.996
DDX18
DEAD-box helicase 18.
  
 0.996
RSL24D1
Ribosomal L24 domain containing 1.
   
 0.996
RSL1D1
Ribosomal L1 domain containing 1.
   
 0.995
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.995
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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