STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000008303annotation not available (336 aa)    
Predicted Functional Partners:
ATP6V0D1
ATPase H+ transporting V0 subunit d1.
   
 0.858
ATP6V0D2
ATPase H+ transporting V0 subunit d2.
   
 0.858
ATP6V0C
ATPase H+ transporting V0 subunit c.
   
 0.854
EPHX2
Epoxide hydrolase 2.
    
 0.839
SOAT1
Sterol O-acyltransferase 1.
    
 0.838
LPIN1
Phosphatidate phosphatase LPIN1-like.
    
 0.829
ATP6V0B
ATPase H+ transporting V0 subunit b.
   
 0.813
PLD1
Phospholipase D1.
   
 0.813
GPD2
Glycerol-3-phosphate dehydrogenase 2.
    
 0.810
ATP6AP2
ATPase H+ transporting accessory protein 2.
    
 0.810
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.