Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCNN1ASodium channel epithelial 1 alpha subunit. (622 aa)    
Predicted Functional Partners:
SCNN1B
Sodium channel epithelial 1 beta subunit.
   
 0.996
SCNN1G
Sodium channel epithelial 1 gamma subunit.
   
 0.996
SCN3B
Sodium voltage-gated channel beta subunit 3.
     
 0.968
SCNN1D
Sodium channel epithelial 1 delta subunit.
     
  0.967
SCN4A
Sodium voltage-gated channel alpha subunit 4.
     
 0.967
SCN4B
Sodium voltage-gated channel beta subunit 4.
     
 0.967
LOC106889657
Sodium channel protein type 5 subunit alpha-like.
     
 0.967
LOC106889645
Sodium channel protein type 5 subunit alpha-like.
     
 0.967
LOC106889728
Sodium channel protein type 5 subunit alpha-like.
     
 0.967
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 0.956
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.