STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000008342annotation not available (282 aa)    
Predicted Functional Partners:
ENSCPUP00000000773
annotation not available
    
  0.877
PLCB2
Phospholipase C beta 2.
     
 0.787
PLCB1
Phospholipase C beta 1.
     
 0.787
GPRC6A
G protein-coupled receptor class C group 6 member A.
     
0.786
PLCB4
Phospholipase C beta 4.
     
 0.784
NME8
NME/NM23 family member 8.
    
 0.737
GNG13
G protein subunit gamma 13.
    
 0.695
RAMP1
Receptor activity modifying protein 1.
     
 0.635
TRIO
Trio Rho guanine nucleotide exchange factor.
    
  0.628
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.609
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.