STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLS1Plastin 1. (588 aa)    
Predicted Functional Partners:
CAPZB
Capping actin protein of muscle Z-line subunit beta.
    
 0.835
EZR
Ezrin.
    
 0.725
BMP4
Bone morphogenetic protein 4.
      
 0.694
RDX
Radixin.
    
 0.674
MSN
Moesin.
    
 0.670
ACTR2
Actin related protein 2.
   
 
 0.621
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.615
CLIC5
Chloride intracellular channel 5.
    
 0.615
MYO1C
Myosin IC.
     
 0.611
CLIC6
Chloride intracellular channel 6.
    
 0.609
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.