STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP6V0A4ATPase H+ transporting V0 subunit a4. (837 aa)    
Predicted Functional Partners:
ATP6V0B
ATPase H+ transporting V0 subunit b.
  
 0.996
ATP6V0C
ATPase H+ transporting V0 subunit c.
  
 0.996
ATP6V1E1
ATPase H+ transporting V1 subunit E1.
  
 0.996
ATP6V0D1
ATPase H+ transporting V0 subunit d1.
  
 0.992
ATP6V1H
ATPase H+ transporting V1 subunit H.
   
 0.992
ATP6V1C1
ATPase H+ transporting V1 subunit C1.
   
 0.990
ATP6V0D2
ATPase H+ transporting V0 subunit d2.
  
 0.988
ATP6V1G1
ATPase H+ transporting V1 subunit G1.
   
 0.987
ATP6AP2
ATPase H+ transporting accessory protein 2.
    
 0.983
ATP6AP1
ATPase H+ transporting accessory protein 1.
   
 0.983
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.