STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000008521annotation not available (173 aa)    
Predicted Functional Partners:
CD79B
CD79b molecule.
   
 0.633
HLA-DRA
H-2 class II histocompatibility antigen, A-Q alpha chain-like.
  
 
  0.623
ENSCPUP00000023468
annotation not available
    
  0.610
ENSCPUP00000011075
annotation not available
    
  0.572
ENSCPUP00000007096
annotation not available
    
 
 0.570
LOC106900028
polyubiquitin-B.
    
 0.570
PTK7
Protein tyrosine kinase 7 (inactive).
    
 0.560
ARG2
Arginase 2.
    
 
 0.553
MAP2
Microtubule associated protein 2.
    
   0.543
MAPT
Microtubule associated protein tau.
    
   0.543
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.