STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUSP15Dual specificity phosphatase 15. (351 aa)    
Predicted Functional Partners:
LOC106895940
Interferon regulatory factor 4-like.
 
  
 0.718
PDLIM4
PDZ and LIM domain 4.
    
 0.716
INPPL1
Inositol polyphosphate phosphatase like 1.
   
 
 0.675
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.629
MOB1A
MOB kinase activator 1A.
    
 0.592
IRF4
Interferon regulatory factor 4.
 
  
 0.561
MYO18B
Myosin XVIIIB.
    
  0.560
MYO18A
Myosin XVIIIA.
    
  0.560
IRF8
Interferon regulatory factor 8.
 
  
 0.559
MAPK9
Mitogen-activated protein kinase 9.
   
 0.554
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.