STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKBP1AFKBP prolyl isomerase 1A. (105 aa)    
Predicted Functional Partners:
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.919
RYR3
Ryanodine receptor 3.
    
 0.875
RYR2
Ryanodine receptor 2.
    
 0.875
PPP3R1
Protein phosphatase 3 regulatory subunit B, alpha.
   
 0.874
ACVR1
Activin A receptor type 1.
    
 0.869
MTOR
Mechanistic target of rapamycin kinase.
    
 
 0.840
ACVR1B
Activin A receptor type 1B.
    
 0.807
ACVR1C
Activin A receptor type 1C.
    
 0.802
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 
 0.792
RPS6KB1
Ribosomal protein S6 kinase B1.
   
 0.775
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.