STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFT22Intraflagellar transport 22. (186 aa)    
Predicted Functional Partners:
IFT81
Intraflagellar transport 81.
    
 0.998
IFT74
Intraflagellar transport 74.
   
 0.995
IFT57
Intraflagellar transport 57.
   
 0.988
IFT52
Intraflagellar transport 52.
   
 0.988
HSPB11
Heat shock protein family B (small) member 11.
   
 0.988
IFT46
Intraflagellar transport 46.
    
 0.986
LOC106895091
Tetratricopeptide repeat protein 30B-like.
    
 0.985
IFT88
Intraflagellar transport 88.
    
 0.985
IFT27
Intraflagellar transport 27.
    
 0.985
IFT80
Intraflagellar transport 80.
   
 0.982
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.