STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POLR2ERNA polymerase II subunit E. (210 aa)    
Predicted Functional Partners:
ENSCPUP00000000679
annotation not available
   
 0.999
POLR3D
RNA polymerase III subunit D.
   
 0.999
CRCP
CGRP receptor component.
   
 0.999
POLR1C
RNA polymerase I and III subunit C.
  
 0.999
ENSCPUP00000003454
annotation not available
   
 0.999
POLR3F
RNA polymerase III subunit F.
   
 0.999
POLR1B
RNA polymerase I subunit B.
  
 0.999
ENSCPUP00000005646
annotation not available
    
 0.999
POLR2J
RNA polymerase II subunit J.
   
 0.999
POLR1E
RNA polymerase I subunit E.
   
 0.999
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.