STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNDP1Carnosine dipeptidase 1. (496 aa)    
Predicted Functional Partners:
ASS1
Argininosuccinate synthase 1.
  
 0.916
CNDP2
Carnosine dipeptidase 2.
  
 
0.902
HAL
Histidine ammonia-lyase.
    
 0.879
LOC106891918
Carnosine synthase 1-like.
    
 0.879
LOC106887534
Carnosine N-methyltransferase 2.
     
 0.878
GFPT2
Glutamine-fructose-6-phosphate transaminase 2.
   
 0.871
GFPT1
Glutamine--fructose-6-phosphate transaminase 1.
   
 0.871
LOC106893947
Glutamine synthetase.
    
 0.864
GLUL
Glutamate-ammonia ligase.
    
 0.864
ABAT
4-aminobutyrate aminotransferase.
   
 0.860
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.