STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRTP1Growth hormone regulated TBC protein 1. (402 aa)    
Predicted Functional Partners:
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
    
 0.829
ARF6
ADP ribosylation factor 6.
    
 0.727
ENSCPUP00000001300
annotation not available
   
 0.707
DAAM2
Dishevelled associated activator of morphogenesis 2.
   
 0.707
FHDC1
FH2 domain containing 1.
   
 0.706
PLK3
Polo like kinase 3.
    
 0.705
PLK4
Polo like kinase 4.
    
 0.705
PLK2
Polo like kinase 2.
    
 0.705
PLK1
Serine/threonine-protein kinase PLK1-like.
    
 0.705
CFAP126
Cilia and flagella associated protein 126.
   
   0.592
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.