STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD10Sterile alpha motif domain containing 10. (195 aa)    
Predicted Functional Partners:
ZNF512B
Zinc finger protein 512B.
 
      0.654
ENSCPUP00000003561
annotation not available
    
 0.562
ENSCPUP00000003563
annotation not available
    
 0.562
CNKSR2
Connector enhancer of kinase suppressor of Ras 2.
    
 0.562
IPCEF1
Interaction protein for cytohesin exchange factors 1.
    
 0.562
CNKSR3
CNKSR family member 3.
    
 0.562
CNKSR1
Connector enhancer of kinase suppressor of Ras 1.
    
 0.562
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.414
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
    
 0.414
KSR2
Kinase suppressor of ras 2.
    
 0.414
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.