STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGAP3ArfGAP with GTPase domain, ankyrin repeat and PH domain 3. (977 aa)    
Predicted Functional Partners:
SMAP2
Small ArfGAP2.
     
0.716
ASAP3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
   
 
0.712
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
     
0.679
UNC5B
Unc-5 netrin receptor B.
    
  0.651
TANC1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1.
    
  0.622
ARAP3
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3.
     
0.587
ARAP2
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2.
     
0.587
CDKN2A
Cyclin dependent kinase inhibitor 2A.
    
  0.586
CDKN2C
Cyclin dependent kinase inhibitor 2C.
    
  0.586
GRM5
Glutamate metabotropic receptor 5.
    
  0.574
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.