STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC23Zinc finger DHHC-type containing 23. (414 aa)    
Predicted Functional Partners:
WRN
WRN RecQ like helicase.
    
 0.648
POT1
Protection of telomeres 1.
    
 0.635
LOC106892042
Uncharacterized LOC106892042.
    
 0.624
TERB1
Telomere repeat binding bouquet formation protein 1.
    
 0.603
GOLGA7
Golgin A7.
    
 0.594
GOLGA7B
Golgin A7 family member B.
    
 0.594
INTS3
Integrator complex subunit 3.
    
  0.578
NBN
Nibrin.
    
  0.553
MRE11
MRE11 homolog, double strand break repair nuclease.
    
  0.543
INTS7
Integrator complex subunit 7.
    
  0.538
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.