STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPAPutative lysosomal acid lipase/cholesteryl ester hydrolase. (399 aa)    
Predicted Functional Partners:
CYP7A1
Cholesterol 7-alpha-monooxygenase.
   
 0.824
SOAT1
Sterol O-acyltransferase 1.
   
 
 0.814
ACSL4
acyl-CoA synthetase long chain family member 4.
   
 0.811
ACSL3
acyl-CoA synthetase long chain family member 3.
   
 0.811
MGLL
Monoglyceride lipase.
    
 0.811
LIPC
Lipase C, hepatic type.
   
 
 0.810
CYP46A1
Cholesterol 24-hydroxylase.
   
 0.803
CYP11A1
Cytochrome P450 family 11 subfamily A member 1.
   
 0.799
CH25H
Cholesterol 25-hydroxylase.
     
 0.795
CEL
Bile salt-activated lipase-like.
  
 
 0.795
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.