STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRP2Neuropilin 2. (936 aa)    
Predicted Functional Partners:
FLT4
Fms related tyrosine kinase 4.
     
 0.830
FLT1
Fms related tyrosine kinase 1.
     
 0.774
LOC106895648
Vascular endothelial growth factor receptor kdr-like.
     
 0.774
KDR
Kinase insert domain receptor.
     
 0.716
PDGFRL
Platelet derived growth factor receptor like.
     
 0.702
SEMA3F
semaphorin-3F-like.
    
 
 0.685
SEMA3C
Semaphorin 3C.
    
 
 0.675
NRCAM
Neuronal cell adhesion molecule.
    
 0.655
CHL1
Cell adhesion molecule L1 like.
    
 0.655
VEGFC
Vascular endothelial growth factor C.
      
 0.610
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.